| Player | Opponent | Min | Referee | Competition | Date |
|---|---|---|---|---|---|
| Matej Rynes | vs Galatasaray | 80' | Alejandro José Hernández Hernández | UEFA Europa League | 15 Feb 2024 |
| Tomas Wiesner | vs Brøndby IF | 57' | – | UEFA Europa League | 9 Dec 2021 |
| Dominik Plechaty | vs AC Milan | 77' | – | UEFA Europa League | 10 Dec 2020 |
| Ondrej Celustka | vs Lille | 64' | – | UEFA Europa League | 3 Dec 2020 |
| Ladislav Krejcí | vs Lille | 23' | – | UEFA Europa League | 22 Oct 2020 |
| Srdan Plavsic | vs Trabzonspor | 88' | – | UEFA Europa League | 15 Aug 2019 |
| Josef Sural | vs Spartak Zlatibor Voda | 90' | – | UEFA Europa League | 2 Aug 2018 |
| Costa Nhamoinesu | vs Rostov | 66' | – | UEFA Europa League | 23 Feb 2017 |
| Tiémoko Konaté | vs Rostov | 32' | – | UEFA Europa League | 16 Feb 2017 |
| Jakub Brabec | vs FCSB | 51' | – | UEFA Champions League | 3 Aug 2016 |
| Ladislav Krejcí | vs Asteras Tripoli | 82' | – | UEFA Europa League | 26 Nov 2015 |
| Michal Breznanik | vs FC Thun | 85' | – | UEFA Europa League | 27 Aug 2015 |
| Marek Matejovský | vs CSKA Moscow | 64' | – | UEFA Champions League | 5 Aug 2015 |
| Lukas Vacha | vs Malmö FF | 90' | Ruddy Buquet | UEFA Champions League | 6 Aug 2014 |
| Jakub Podany | vs FC Vaslui | 85' | Thomas Einwaller | UEFA Europa League | 25 Aug 2011 |